parmed.formats.pdbx package

Module contents

The PDBx package here was taken from the wwPDB website written by John Westbook (and modified slightly to fix issues with Python 3 support as well as unified exception handling)

class parmed.formats.pdbx.PdbxReader(ifh)[source]

Bases: object

PDBx reader for data files and dictionaries.

Methods

read(containerList)[source]

Appends to the input list of definition and data containers.

class parmed.formats.pdbx.PdbxWriter(ofh=<_io.TextIOWrapper name='<stdout>' mode='w' encoding='UTF-8'>)[source]

Bases: object

Write PDBx data files or dictionaries using the input container or container list.

Methods

write

writeContainer
setRowPartition(numRows)[source]

Maximum number of rows checked for value length and format

write(containerList)[source]
writeContainer(container)[source]